Mark A. Hallen: search on Z-Library

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1

Mass Spectrometry- and Lysine Amidination-Based Protocol for Thermodynamic Analysis of Protein Folding and Ligand Binding Interactions

Xu, Ying, Falk, Irene N., Hallen, Mark A., Fitzgerald, Michael C.

Journal:

Analytical Chemistry

Year:

2011

Language:

english

File:

PDF, 2.29 MB

english, 2011

2

Microtubule Binding and Rotation of the Kinesin-14 Stalk

Endow, Sharyn A., Liang, Zhang-Yi, Hallen, Mark A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 39 KB

english, 2009

3

Increased Mechanical Output by a Kinesin Mutant

Liu, Hong-Lei, Hallen, Mark A., Endow, Sharyn A.

Journal:

Biophysical Journal

Year:

2013

Language:

english

File:

PDF, 34 KB

english, 2013

4

PLUG (Pruning of Local Unrealistic Geometries) removes restrictions on biophysical modeling for protein design

Hallen, Mark A.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2018

Language:

english

File:

PDF, 2.29 MB

english, 2018

5

Two-state displacement by the kinesin-14 Ncd stalk

Mark A. Hallen, Zhang-Yi Liang, Sharyn A. Endow

Journal:

Biophysical Chemistry

Year:

2011

Language:

english

File:

PDF, 937 KB

english, 2011

6

Na + /H + Exchanger NHE3 Has 11 Membrane Spanning Domains and a Cleaved Signal Peptide: Topology Analysis Using In Vitro Transcription/Translation †

Zizak, Mirza, Cavet, Megan E., Bayle, Denis, Tse, Chung-Ming, Hallen, Stefan, Sachs, George, Donowitz, Mark

Journal:

Year:

2000

Language:

english

File:

PDF, 274 KB

english, 2000

7

cOSPREY: A Cloud-Based Distributed Algorithm for Large-Scale Computational Protein Design

Pan, Yuchao, Dong, Yuxi, Zhou, Jingtian, Hallen, Mark, Donald, Bruce R., Zeng, Jianyang, Xu, Wei

Journal:

Journal of Computational Biology

Year:

2016

Language:

english

File:

PDF, 352 KB

english, 2016

8

Impact of Parcel Size, Field Shape, Crop Yield, Storage Location, and Collection Equipment on the Performance of Single-Pass Cut-and-Chip Harvest System in Commercial Shrub Willow Fields

Ebadian, Mahmood, Shedden, Magen Elizabeth, Webb, Erin, Sokhansanj, Shahab, Eisenbies, Mark, Volk, Timothy, Heavey, Justin, Hallen, Karl

Journal:

BioEnergy Research

Year:

2018

Language:

english

File:

PDF, 1.60 MB

english, 2018

9

Anastral spindle assembly and γ-tubulin inDrosophilaoocytes

Sharyn A Endow, Mark A Hallen

Journal:

BMC Cell Biology

Year:

2011

Language:

english

File:

PDF, 1.93 MB

english, 2011

10

Expanding the scope of quantitative FRAP analysis

Mark A. Hallen, Anita T. Layton

Journal:

Journal of Theoretical Biology

Year:

2010

Language:

english

File:

PDF, 681 KB

english, 2010

11

Dead-end elimination with perturbations (DEEPer): A provable protein design algorithm with continuous sidechain and backbone flexibility

Mark A. Hallen, Daniel A. Keedy, Bruce R. Donald

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2012

Language:

english

File:

PDF, 1.32 MB

english, 2012

12

Intraaortic balloon pump insertion: A randomized study comparing percutaneous and surgical techniques

Mark J. Goldberg, Melvyn Rubenfire, Adrian Kantrowitz, Gary Goodman, Paul S. Freed, Leonard Hallen, Paula Reimann

Journal:

Journal of the American College of Cardiology

Year:

1987

Language:

english

File:

PDF, 1.39 MB

english, 1987

13

A Microtubule-Destabilizing Kinesin Motor Regulates Spindle Length and Anchoring in Oocytes

Jianwei Zou, Mark A. Hallen, Christine D. Yankel and Sharyn A. Endow

Journal:

The Journal of Cell Biology

Year:

2008

Language:

english

File:

PDF, 1.38 MB

english, 2008

14

Fluorescence Recovery Kinetic Analysis of γ-Tubulin Binding to the Mitotic Spindle

Hallen, Mark A., Ho, Jianghai, Yankel, Christine D., Endow, Sharyn A.

Journal:

Biophysical Journal

Year:

2008

Language:

english

File:

PDF, 834 KB

english, 2008

15

Mature Drosophila Meiosis I Spindles Comprise Microtubules of Mixed Polarity

Zhang-Yi Liang, Mark Andrew Hallen, Sharyn Anne Endow

Journal:

Current Biology

Year:

2009

Language:

english

File:

PDF, 864 KB

english, 2009

16

LUTE (Local Unpruned Tuple Expansion): Accurate Continuously Flexible Protein Design with General Energy Functions and Rigid-Rotamer-Like Efficiency

Hallen, Mark A., Jou, Jonathan D., Donald, Bruce R.

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 42 KB

english, 2017

17

Fast gap-free enumeration of conformations and sequences for protein design

Roberts, Kyle E., Gainza, Pablo, Hallen, Mark A., Donald, Bruce R.

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2015

Language:

english

File:

PDF, 818 KB

english, 2015

18

Cut and chip harvester material capacity and fuel performance on commercialâscale willow fields for varying ground and crop conditions

Eisenbies, Mark H, Volk, Timothy A, de Souza, Daniel P.L., Hallen, Karl W.

Journal:

Year:

2020

File:

PDF, 15.31 MB

2020

19

Computation of Steady-State Probability Distributions in Stochastic Models of Cellular Networks

Hallen, Mark, Li, Bochong, Tanouchi, Yu, Tan, Cheemeng, West, Mike, You, Lingchong, Rao, Christopher V.

Journal:

PLoS Computational Biology

Year:

2011

Language:

english

File:

PDF, 1.26 MB

english, 2011

20

Three bulk density measurement methods provide different results for commercial scale harvests of willow biomass chips

Eisenbies, Mark H., Volk, Timothy A., Therasme, Obste, Hallen, Karl

Journal:

Biomass and Bioenergy

Year:

2019

Language:

english

File:

PDF, 901 KB

english, 2019

21

comets (Constrained Optimization of Multistate Energies by Tree Search): A Provable and Efficient Protein Design Algorithm to Optimize Binding Affinity and Specificity with Respect to Sequence

Hallen, Mark A., Donald, Bruce R.

Journal:

Journal of Computational Biology

Year:

2016

Language:

english

File:

PDF, 444 KB

english, 2016

22

Altered Nucleotide-Microtubule Coupling and Increased Mechanical Output by a Kinesin Mutant

Liu, Hong-Lei, Hallen, Mark A., Endow, Sharyn A., George, Anthony

Journal:

Year:

2012

Language:

english

File:

PDF, 1.00 MB

english, 2012

23

A small-molecule benzimidazole derivative that potently activates AMPK to increase glucose transport in skeletal muscle: comparison with effects of contraction and other AMPK activators

Lai, Yu‑Chiang, Kviklyte, Samanta, Vertommen, Didier, Lantier, Louise, Foretz, Marc, Viollet, Benoît, Hallén, Stefan, Rider, Mark H.

Journal:

Biochemical Journal

Year:

2014

Language:

english

File:

PDF, 1.38 MB

english, 2014

24

Fungal metabolites as precursors to renewable transportation fuels

Butcher, Mark G., Meyer, Pimphan A., Hallen, Richard T., Albrecht, Karl O., Clayton, Christopher K., Polikarpov, Evgueni, Rappe, Kenneth G., Jones, Susanne B., Magnuson, Jon K.

Journal:

Year:

2018

Language:

english

File:

PDF, 2.27 MB

english, 2018

25

LUTE (Local Unpruned Tuple Expansion): Accurate Continuously Flexible Protein Design with General Energy Functions and Rigid Rotamer-Like Efficiency

Hallen, Mark A., Jou, Jonathan D., Donald, Bruce R.

Journal:

Journal of Computational Biology

Year:

2016

Language:

english

File:

PDF, 316 KB

english, 2016

26

CATS (Coordinates of Atoms by Taylor Series): protein design with backbone flexibility in all locally feasible directions

Hallen, Mark A, Donald, Bruce R

Journal:

Year:

2017

Language:

english

File:

PDF, 447 KB

english, 2017

27

Computing Conformational Entropy in Antibody Interfaces

Gainza, Pablo, Roberts, Kyle E., Hallen, Mark A., Donald, Bruce R.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 40 KB

english, 2014

28

Activation of Erythropoietin Receptor through a Novel Extracellular Binding Site

Naranda, Tatjana, Kaufman, R. Ilene, Li, Jin, Wong, Kenneth, Boge, Annegret, Hallén, Dan, Fung, Kim Y. C., Duncan, Mark W., Andersen, Niels, Goldstein, Avram, Olsson, Lennart

Journal:

Year:

2002

Language:

english

File:

PDF, 379 KB

english, 2002

29

Anastral Spindle Assembly: A Mathematical Model

Hallen, Mark A., Endow, Sharyn A.

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 638 KB

english, 2009

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